STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORW02889.1PE-PGRS family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (779 aa)    
Predicted Functional Partners:
ORW00475.1
Secretion protein EspK; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.613
ORW02887.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.600
ORW06292.1
Type VII secretion integral membrane protein EccD; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.589
ORW03811.1
Alpha-(1-2)-phosphatidylinositol mannosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.509
ORW02880.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.482
ORV99152.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.435
ORW03574.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.421
ORW05998.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
0.419
ORW06345.1
1,4-beta-glucanase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase family 6.
    
  0.418
ORW00483.1
Peptidase S49; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.416
Your Current Organism:
Mycobacterium lacus
NCBI taxonomy Id: 169765
Other names: ATCC BAA-323, DSM 44577, JCM 15657, M. lacus, Mycobacterium lacus Turenne et al. 2002, NRCM 00-255
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.