STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORW00538.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (367 aa)    
Predicted Functional Partners:
ORW00481.1
Cell motility protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.882
ORW00487.1
Secretion protein EspG; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.861
ORW00476.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.755
ORW01154.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  
 0.729
ORW00480.1
Type VII secretion protein EsxB; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the WXG100 family.
     
 0.687
ORW00479.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the WXG100 family.
     
 0.617
ORW00482.1
Peptidase S49; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.530
ORW00485.1
Type VII secretion AAA-ATPase EccA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.512
ORW00478.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.481
ORW00483.1
Peptidase S49; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.468
Your Current Organism:
Mycobacterium lacus
NCBI taxonomy Id: 169765
Other names: ATCC BAA-323, DSM 44577, JCM 15657, M. lacus, Mycobacterium lacus Turenne et al. 2002, NRCM 00-255
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.