STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORW14398.1ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (447 aa)    
Predicted Functional Partners:
ORW03809.1
Cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 
 0.783
ORW14960.1
Cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 
 0.730
ORW12662.1
XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.672
ORW14958.1
Cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.618
ORW12129.1
Cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.611
ORW13603.1
Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.586
ORW14396.1
Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.569
ORW14397.1
Cyclodehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.569
ORW14028.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.474
ORW00201.1
Cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 
 0.462
Your Current Organism:
Mycobacterium lacus
NCBI taxonomy Id: 169765
Other names: ATCC BAA-323, DSM 44577, JCM 15657, M. lacus, Mycobacterium lacus Turenne et al. 2002, NRCM 00-255
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.