STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001304855_00848Unannotated protein. (108 aa)    
Predicted Functional Partners:
GCA_001304855_00847
Unannotated protein.
       0.789
GCA_001304855_00849
Unannotated protein.
       0.737
GCA_001304855_00850
Unannotated protein.
       0.718
GCA_001304855_00845
Unannotated protein.
       0.563
GCA_001304855_00851
Unannotated protein.
       0.552
GCA_001304855_00853
Unannotated protein.
       0.534
GCA_001304855_00852
Unannotated protein.
       0.526
GCA_001304855_00854
Unannotated protein.
       0.444
GCA_001304855_00855
Unannotated protein.
       0.431
GCA_001304855_00856
Unannotated protein.
       0.431
Your Current Organism:
Clostridia bacterium UC511D2
NCBI taxonomy Id: 1697780
Other names: C. bacterium UC5.1-1D2, Clostridia bacterium UC5.1-1D2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.