STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001304875_02514Unannotated protein. (80 aa)    
Predicted Functional Partners:
GCA_001304875_02515
Unannotated protein.
       0.723
GCA_001304875_02508
Unannotated protein.
 
     0.714
GCA_001304875_02525
Unannotated protein.
  
     0.692
GCA_001304875_02512
Unannotated protein.
       0.675
GCA_001304875_02513
Unannotated protein.
       0.675
GCA_001304875_02490
Unannotated protein.
 
     0.657
GCA_001304875_02491
Unannotated protein.
 
     0.644
GCA_001304875_02518
Unannotated protein.
 
     0.643
GCA_001304875_02519
Unannotated protein.
  
     0.625
GCA_001304875_02526
Unannotated protein.
  
     0.595
Your Current Organism:
Clostridia bacterium UC512E3
NCBI taxonomy Id: 1697781
Other names: C. bacterium UC5.1-2E3, Clostridia bacterium UC5.1-2E3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.