STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001304875_03187Unannotated protein. (65 aa)    
Predicted Functional Partners:
GCA_001304875_03185
Unannotated protein.
 
 0.999
GCA_001304875_03186
Unannotated protein.
     0.988
GCA_001304875_03287
Unannotated protein.
   
 0.985
GCA_001304875_00798
Unannotated protein.
 
 0.950
GCA_001304875_00796
Unannotated protein.
  
 0.944
GCA_001304875_00797
Unannotated protein.
  
 0.944
GCA_001304875_03481
Unannotated protein.
 
 0.944
GCA_001304875_03483
Unannotated protein.
 
 0.940
GCA_001304875_00799
Unannotated protein.
 
 0.935
GCA_001304875_03484
Unannotated protein.
  
 0.928
Your Current Organism:
Clostridia bacterium UC512E3
NCBI taxonomy Id: 1697781
Other names: C. bacterium UC5.1-2E3, Clostridia bacterium UC5.1-2E3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.