Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_001646945_00075 | barA_1 | GCA_001646945_00075 | GCA_001646945_02852 | Putative signaling protein. | Signal transduction histidine-protein kinase BarA. | 0.999 |
GCA_001646945_00075 | barA_2 | GCA_001646945_00075 | GCA_001646945_02941 | Putative signaling protein. | Signal transduction histidine-protein kinase BarA. | 0.999 |
GCA_001646945_00075 | barA_3 | GCA_001646945_00075 | GCA_001646945_03283 | Putative signaling protein. | Signal transduction histidine-protein kinase BarA. | 0.998 |
GCA_001646945_00075 | cph2 | GCA_001646945_00075 | GCA_001646945_02384 | Putative signaling protein. | Phytochrome-like protein cph2. | 0.999 |
GCA_001646945_00075 | frzE | GCA_001646945_00075 | GCA_001646945_01289 | Putative signaling protein. | Gliding motility regulatory protein. | 0.998 |
GCA_001646945_00075 | luxQ_1 | GCA_001646945_00075 | GCA_001646945_00135 | Putative signaling protein. | Autoinducer 2 sensor kinase/phosphatase LuxQ. | 0.998 |
GCA_001646945_00075 | pdeB | GCA_001646945_00075 | GCA_001646945_01142 | Putative signaling protein. | Cyclic di-GMP phosphodiesterase PdeB. | 0.999 |
GCA_001646945_00075 | pleD_2 | GCA_001646945_00075 | GCA_001646945_05066 | Putative signaling protein. | Response regulator PleD. | 0.994 |
GCA_001646945_00075 | rpfC_1 | GCA_001646945_00075 | GCA_001646945_01706 | Putative signaling protein. | Sensory/regulatory protein RpfC. | 0.994 |
GCA_001646945_00075 | yegE | GCA_001646945_00075 | GCA_001646945_02618 | Putative signaling protein. | Putative diguanylate cyclase YegE. | 0.999 |
barA_1 | GCA_001646945_00075 | GCA_001646945_02852 | GCA_001646945_00075 | Signal transduction histidine-protein kinase BarA. | Putative signaling protein. | 0.999 |
barA_1 | barA_2 | GCA_001646945_02852 | GCA_001646945_02941 | Signal transduction histidine-protein kinase BarA. | Signal transduction histidine-protein kinase BarA. | 0.995 |
barA_1 | barA_3 | GCA_001646945_02852 | GCA_001646945_03283 | Signal transduction histidine-protein kinase BarA. | Signal transduction histidine-protein kinase BarA. | 0.995 |
barA_1 | cph2 | GCA_001646945_02852 | GCA_001646945_02384 | Signal transduction histidine-protein kinase BarA. | Phytochrome-like protein cph2. | 0.999 |
barA_1 | frzE | GCA_001646945_02852 | GCA_001646945_01289 | Signal transduction histidine-protein kinase BarA. | Gliding motility regulatory protein. | 0.997 |
barA_1 | luxQ_1 | GCA_001646945_02852 | GCA_001646945_00135 | Signal transduction histidine-protein kinase BarA. | Autoinducer 2 sensor kinase/phosphatase LuxQ. | 0.997 |
barA_1 | pdeB | GCA_001646945_02852 | GCA_001646945_01142 | Signal transduction histidine-protein kinase BarA. | Cyclic di-GMP phosphodiesterase PdeB. | 0.999 |
barA_1 | pleD_2 | GCA_001646945_02852 | GCA_001646945_05066 | Signal transduction histidine-protein kinase BarA. | Response regulator PleD. | 0.993 |
barA_1 | rpfC_1 | GCA_001646945_02852 | GCA_001646945_01706 | Signal transduction histidine-protein kinase BarA. | Sensory/regulatory protein RpfC. | 0.999 |
barA_1 | yegE | GCA_001646945_02852 | GCA_001646945_02618 | Signal transduction histidine-protein kinase BarA. | Putative diguanylate cyclase YegE. | 0.999 |
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