STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001269805_02117Unannotated protein. (458 aa)    
Predicted Functional Partners:
GCA_001269805_02118
Unannotated protein.
 
 0.998
GCA_001269805_00389
Unannotated protein.
 
 0.988
GCA_001269805_01742
Unannotated protein.
 
 0.971
GCA_001269805_02958
Unannotated protein.
 
 0.970
GCA_001269805_04659
Unannotated protein.
  
  
 0.922
GCA_001269805_01956
Unannotated protein.
  
 
 0.902
GCA_001269805_04363
Unannotated protein.
  
 
 0.901
GCA_001269805_01952
Unannotated protein.
  
 
 0.889
GCA_001269805_02907
Unannotated protein.
  
 
 0.885
GCA_001269805_04580
Unannotated protein.
  
 
 0.877
Your Current Organism:
Pseudomonas sp. P18
NCBI taxonomy Id: 1699310
Other names: P. sp. P1.8, Pseudomonas sp. P1.8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.