STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lmo0059Lmo0059 protein; Similar to B. subtilis YukD protein; Belongs to the EsaB family. (83 aa)    
Predicted Functional Partners:
lmo0060
Lmo0060 protein; Similar to B. subtilis YukC protein.
  
  
 0.920
lmo0058
Lmo0058 protein.
  
  
 0.863
lmo0057
Lmo0057 protein; Similar to B. subtilis YueB protein.
  
  
 0.862
lmo0061
Lmo0061 protein; Highly similar to B. subtilis YukA protein.
  
  
 0.828
lmo0066
Lmo0066 protein; Similar to toxin components.
  
    0.656
lmo0064
Lmo0064 protein.
       0.641
lmo0062
Lmo0062 protein.
       0.638
lmo0063
Lmo0063 protein.
       0.638
lmo0056
Similar to a small heat shock protein of Clostridium acetobutylicum; Belongs to the WXG100 family.
     
 0.636
lmo0065
Lmo0065 protein.
       0.633
Your Current Organism:
Listeria monocytogenes
NCBI taxonomy Id: 169963
Other names: L. monocytogenes EGD-e, Listeria monocytogenes ATCC BAA-679, Listeria monocytogenes EGD-e, Listeria monocytogenes EGDe, Listeria monocytogenes str. EGD-e, Listeria monocytogenes strain EGD-e
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.