STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lmo0061Lmo0061 protein; Highly similar to B. subtilis YukA protein. (1498 aa)    
Predicted Functional Partners:
lmo0056
Similar to a small heat shock protein of Clostridium acetobutylicum; Belongs to the WXG100 family.
 
 
 0.983
lmo0060
Lmo0060 protein; Similar to B. subtilis YukC protein.
 
  
 0.977
lmo0066
Lmo0066 protein; Similar to toxin components.
 
  
 0.965
lmo0057
Lmo0057 protein; Similar to B. subtilis YueB protein.
 
  
 0.952
lmo0059
Lmo0059 protein; Similar to B. subtilis YukD protein; Belongs to the EsaB family.
  
  
 0.828
lmo0058
Lmo0058 protein.
  
  
 0.768
lmo0063
Lmo0063 protein.
  
    0.750
lmo0062
Lmo0062 protein.
  
    0.749
lmo0435
Putative peptidoglycan bound protein (LPXTG motif).
  
 
 0.743
lmo0064
Lmo0064 protein.
  
    0.727
Your Current Organism:
Listeria monocytogenes
NCBI taxonomy Id: 169963
Other names: L. monocytogenes EGD-e, Listeria monocytogenes ATCC BAA-679, Listeria monocytogenes EGD-e, Listeria monocytogenes EGDe, Listeria monocytogenes str. EGD-e, Listeria monocytogenes strain EGD-e
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.