STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lmaAAntigen A. (170 aa)    
Predicted Functional Partners:
lmaB
Antigen B.
  
  
 0.904
lmo0127
Weakly similar to protein gp20 from Bacteriophage A118.
  
   0.841
lmo2283
Protein gp20 [Bacteriophage A118].
  
   0.707
lmo2116
Lmo2116 protein.
   
    0.685
lmo0119
Lmo0119 protein.
  
    0.672
lmo0120
Lmo0120 protein.
  
    0.631
lmaC
LmaC protein; Similar to Antigen C.
     
 0.600
lmo0121
Lmo0121 protein; Similar to bacteriophage minor tail proteins.
  
    0.589
lmaD
LmaD protein; Similar to Antigen D.
     
 0.560
lmo0122
Similar to phage proteins.
  
    0.556
Your Current Organism:
Listeria monocytogenes
NCBI taxonomy Id: 169963
Other names: L. monocytogenes EGD-e, Listeria monocytogenes ATCC BAA-679, Listeria monocytogenes EGD-e, Listeria monocytogenes EGDe, Listeria monocytogenes str. EGD-e, Listeria monocytogenes strain EGD-e
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.