STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lmo0348Lmo0348 protein; Similar to dihydroxyacetone kinase. (331 aa)    
Predicted Functional Partners:
lmo0347
Lmo0347 protein; Similar to dihydroxyacetone kinase.
 
 0.999
lmo0351
Similar to unknown proteins.
 
 0.997
lmo2696
Lmo2696 protein; Similar to hypothetical dihydroxyacetone kinase.
 
 0.997
lmo2697
Lmo2697 protein.
 
 0.993
lmo0344
Lmo0344 protein; Similar to dehydrogenase/reductase.
  
 0.977
lmo1996
Lmo1996 protein; Similar to transcription repressor of dra/nupC/pdp operon DeoR.
 
  0.942
lmo0547
Lmo0547 protein; Similar to B. subtilis DeoR transcriptional regulator.
  
  0.941
lmo2695
Lmo2695 protein; Similar to dihydroxyacetone kinase.
  
 
 
0.901
lmo0346
Probable triosephosphate isomerase 2; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
  
 
 0.895
glpD
Similar to glycerol 3 phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
    
 0.889
Your Current Organism:
Listeria monocytogenes
NCBI taxonomy Id: 169963
Other names: L. monocytogenes EGD-e, Listeria monocytogenes ATCC BAA-679, Listeria monocytogenes EGD-e, Listeria monocytogenes EGDe, Listeria monocytogenes str. EGD-e, Listeria monocytogenes strain EGD-e
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.