STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lmo0404Lmo0404 protein. (132 aa)    
Predicted Functional Partners:
lmo0403
Lmo0403 protein.
  
    0.783
lmo0405
Lmo0405 protein; Similar to phosphate transport protein.
       0.515
lmo0402
Lmo0402 protein; Similar to transcriptional antiterminator (BglG family).
       0.497
lmo0406
Lmo0406 protein; Similar to B. subtilis YyaH protein.
  
    0.492
lmo0401
Lmo0401 protein; Highly similar to E. col YbgG protein, a putative sugar hydrolase.
       0.433
lmo0398
Lmo0398 protein; Similar to phosphotransferase system enzyme IIA.
       0.401
lmo0399
Lmo0399 protein; Similar to fructose-specific phosphotransferase enzyme IIB.
       0.401
lmo0400
Lmo0400 protein; Similar to fructose-specific phosphotransferase enzyme IIC.
       0.401
Your Current Organism:
Listeria monocytogenes
NCBI taxonomy Id: 169963
Other names: L. monocytogenes EGD-e, Listeria monocytogenes ATCC BAA-679, Listeria monocytogenes EGD-e, Listeria monocytogenes EGDe, Listeria monocytogenes str. EGD-e, Listeria monocytogenes strain EGD-e
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.