STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lmo0487Lmo0487 protein. (242 aa)    
Predicted Functional Partners:
nifJ
NifJ protein; Highly similar to pyruvate-flavodoxin oxidoreductase.
    
 0.793
cinA
Similar to competence-damage inducible protein CinA; Belongs to the CinA family.
    
 0.718
pykA
Highly similar to pyruvate kinases.
  
 
  0.717
lmo2162
Similar to unknown proteins.
   
    0.625
lmo0431
Lmo0431 protein; Similar to acetyltransferase.
   
    0.616
lmo2722
Lmo2722 protein; Similar to merR-family transcriptional regulator.
   
    0.607
lmo1092
Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family.
 
  
 0.562
rpmF
Ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.
       0.552
lmo0485
Lmo0485 protein.
    
  0.550
lmo2094
Lmo2094 protein; Similar to L-fuculose-phosphate aldolase.
  
    0.533
Your Current Organism:
Listeria monocytogenes
NCBI taxonomy Id: 169963
Other names: L. monocytogenes EGD-e, Listeria monocytogenes ATCC BAA-679, Listeria monocytogenes EGD-e, Listeria monocytogenes EGDe, Listeria monocytogenes str. EGD-e, Listeria monocytogenes strain EGD-e
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.