Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
lmo0546Lmo0546 protein; Similar to putative NAD(P)-dependent oxidoreductase. (416 aa)    
Predicted Functional Partners:
lmo0544
Lmo0544 protein; Similar to PTS system, glucitol/sorbitol-specific enzyme II CII component.
 
     0.920
lmo0543
Lmo0543 protein; Similar to PTS system, glucitol/sorbitol-specific enzyme IIBC component.
 
     0.908
lmo0542
Lmo0542 protein; Similar to PTS system, glucitol/sorbitol-specific enzyme IIA component.
 
     0.903
lmo0547
Lmo0547 protein; Similar to B. subtilis DeoR transcriptional regulator.
 
     0.820
lmo0545
Lmo0545 protein.
       0.683
lmo1996
Lmo1996 protein; Similar to transcription repressor of dra/nupC/pdp operon DeoR.
 
     0.413
Your Current Organism:
Listeria monocytogenes
NCBI taxonomy Id: 169963
Other names: L. monocytogenes EGD-e, Listeria monocytogenes ATCC BAA-679, Listeria monocytogenes EGD-e, Listeria monocytogenes EGDe, Listeria monocytogenes str. EGD-e, Listeria monocytogenes strain EGD-e
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.