STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lmo0645Lmo0645 protein; Similar to amino acid transporter. (463 aa)    
Predicted Functional Partners:
lmo0184
Lmo0184 protein; Similar to oligo-1,6-glucosidase.
   
 0.613
lmo0862
Lmo0862 protein; Similar to oligo-1,6-glucosidase.
   
 0.613
lmo1254
Lmo1254 protein; Similar to alpha,alpha-phosphotrehalase.
   
 0.613
lmo2126
Lmo2126 protein; Similar to maltogenic amylase; Belongs to the glycosyl hydrolase 13 family.
   
 0.613
lmo2735
Similar to Sucrose phosphorylase.
   
 0.613
lmo2840
Similar to Sucrose phosphorylase.
   
 0.613
lmo2841
Lmo2841 protein; Weakly similar to sucrose phosphorylase.
   
 0.613
lmo0646
Similar to unknown proteins.
  
    0.544
lmo0644
Lmo0644 protein; Similar to conserved hypothetical proteins; Belongs to the LTA synthase family.
  
    0.470
lmo0847
Lmo0847 protein; Similar to Glutamine ABC transporter (binding and transport protein).
   
  
 0.460
Your Current Organism:
Listeria monocytogenes
NCBI taxonomy Id: 169963
Other names: L. monocytogenes EGD-e, Listeria monocytogenes ATCC BAA-679, Listeria monocytogenes EGD-e, Listeria monocytogenes EGDe, Listeria monocytogenes str. EGD-e, Listeria monocytogenes strain EGD-e
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.