STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lmo0902Lmo0902 protein; Similar to transcription regulator (GntR family). (237 aa)    
Predicted Functional Partners:
lmo0948
Lmo0948 protein; Similar to transcription regulator.
  
    0.720
lmo2692
Lmo2692 protein.
   
    0.661
lmo0901
Permease IIC component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
 
    0.643
nifJ
NifJ protein; Highly similar to pyruvate-flavodoxin oxidoreductase.
    
  0.628
lmo0109
Lmo0109 protein; Similar to transcriptional regulatory proteins, AraC family.
   
  
 0.525
lmo2164
Lmo2164 protein; Similar to transcriptional regulator (AraC/XylS family).
   
  
 0.525
lmo0770
Lmo0770 protein; Similar to transcriptional regulator (LacI family).
  
    0.515
lmo1057
Lmo1057 protein; Similar to L-lactate dehydrogenase.
  
 
  0.429
lmo0737
Lmo0737 protein.
 
 
  0.412
Your Current Organism:
Listeria monocytogenes
NCBI taxonomy Id: 169963
Other names: L. monocytogenes EGD-e, Listeria monocytogenes ATCC BAA-679, Listeria monocytogenes EGD-e, Listeria monocytogenes EGDe, Listeria monocytogenes str. EGD-e, Listeria monocytogenes strain EGD-e
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.