STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lmo1057Lmo1057 protein; Similar to L-lactate dehydrogenase. (317 aa)    
Predicted Functional Partners:
nifJ
NifJ protein; Highly similar to pyruvate-flavodoxin oxidoreductase.
  
 
 0.989
lmo1058
UPF0223 protein lmo1058; Similar to B. subtilis YktA protein; Belongs to the UPF0223 family.
  
    0.962
pykA
Highly similar to pyruvate kinases.
  
 0.944
lmo1734
Lmo1734 protein; Similar to glutamate synthase (large subunit).
  
 
 0.913
citZ
Highly similar to citrate synthase subunit II.
  
 0.884
lmo1059
Lmo1059 protein.
  
    0.841
citC
Isocitrate dehydrogenase [NADP]; Highly similar to isocitrate dehyrogenases.
  
 
 0.835
lmo0355
Lmo0355 protein; Similar to Flavocytochrome C Fumarate Reductase chain A; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
  
 0.761
citG
Fumarate hydratase class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
  
 0.692
pdhC
Highly similar to pyruvate dehydrogenase (dihydrolipoamide acetyltransferase E2 subunit).
  
 0.687
Your Current Organism:
Listeria monocytogenes
NCBI taxonomy Id: 169963
Other names: L. monocytogenes EGD-e, Listeria monocytogenes ATCC BAA-679, Listeria monocytogenes EGD-e, Listeria monocytogenes EGDe, Listeria monocytogenes str. EGD-e, Listeria monocytogenes strain EGD-e
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.