STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lmo1073Lmo1073 protein; Similar to metal binding protein (ABC transporter). (299 aa)    
Predicted Functional Partners:
lmo2430
Lmo2430 protein; Similar to B. subtilis ferrichrome ABC transporter (permease) FhuG; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.963
lmo2183
Lmo2183 protein; Similar to ferrichrome ABC transporter (permease); Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.962
fhuG
FhuG protein; Similar to ferrichrome ABC transporter (permease); Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.961
fhuB
FhuB protein; Similar to ferrichrome ABC transporter (permease); Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.959
lmo2182
Lmo2182 protein; Similar to ferrichrome ABC transporter (ATP-binding protein).
 
 0.943
lmo2429
Lmo2429 protein; Similar to B. subtilis ferrichrome ABC transporter (ATP-binding protein) FhuC.
 
 0.940
fhuC
FhuC protein; Similar to ferrichrome ABC transporter (ATP-binding protein).
 
 0.939
lmo2431
Lmo2431 protein; Similar to B. subtilis ferrichrome ABC transporter fhuD precursor (ferrichrome-binding protein).
 
    
0.653
lmo0365
Lmo0365 protein.
   
  
 0.527
pycA
Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.
  
  
 0.491
Your Current Organism:
Listeria monocytogenes
NCBI taxonomy Id: 169963
Other names: L. monocytogenes EGD-e, Listeria monocytogenes ATCC BAA-679, Listeria monocytogenes EGD-e, Listeria monocytogenes EGDe, Listeria monocytogenes str. EGD-e, Listeria monocytogenes strain EGD-e
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.