STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lmo1149Lmo1149 protein; Similar to alpha-ribazole-5'-phosphatase. (191 aa)    
Predicted Functional Partners:
lmo1148
Adenosylcobinamide-GDP ribazoletransferase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.
 
 
 0.991
lmo1147
Lmo1147 protein; Similar to bifunctional cobalamin biosynthesis protein CopB, (cobinamide kinase; cobinamide phosphatase guanylyltransferase).
 
 
 0.938
lmo1146
Lmo1146 protein.
  
    0.861
lmo0557
Lmo0557 protein; Similar to phosphoglycerate mutase.
  
     0.756
lmo1144
Lmo1144 protein; Similar to Salmonelle enterica PduU protein.
  
    0.738
lmo1145
Lmo1145 protein; Similar to Salmonella enterica PduV protein; Belongs to the EutP/PduV family.
  
    0.731
lmo0556
Lmo0556 protein; Similar to phosphoglycerate mutase.
  
     0.706
lmo0907
Lmo0907 protein; Similar to phosphoglycerate mutase.
  
     0.692
lmo0517
Lmo0517 protein; Similar to phosphoglycerate mutase.
  
     0.680
lmo1192
Cobalamin biosynthesis protein CobD; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.
 
 
 0.639
Your Current Organism:
Listeria monocytogenes
NCBI taxonomy Id: 169963
Other names: L. monocytogenes EGD-e, Listeria monocytogenes ATCC BAA-679, Listeria monocytogenes EGD-e, Listeria monocytogenes EGDe, Listeria monocytogenes str. EGD-e, Listeria monocytogenes strain EGD-e
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.