STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lmo1153Lmo1153 protein; Highly similar to propanediol dehydratase, alpha subunit. (554 aa)    
Predicted Functional Partners:
lmo1154
Lmo1154 protein; Similar to diol dehydrase (diol dehydratase) gamma subunit.
 0.999
lmo1155
Lmo1155 protein; Similar to diol dehydrase (diol dehydratase) gamma subunit (pddC).
 
 0.999
lmo1152
Lmo1152 protein; Similar to Salmonella typhimurium PduB protein.
 
  
 0.992
lmo1165
Lmo1165 protein; Similar to ethanolamine utilization protein EutE.
 
 
 0.987
lmo1157
Lmo1157 protein; Similar to diol dehydratase-reactivating factor small chain.
 
  
 0.973
lmo1156
Lmo1156 protein; Similar to diol dehydratase-reactivating factor large subunit.
 
  
 0.945
lmo1166
Lmo1166 protein; Similar to NADPH-dependent butanol dehydrogenase.
  
 
 0.939
lmo1164
Hyghly similar to Salmonella enterica PduO protein; Belongs to the Cob(I)alamin adenosyltransferase family.
 
  
 0.919
lmo1162
Lmo1162 protein.
  
  
 0.906
lmo1163
Lmo1163 protein; Similar to carbon dioxide concentrating mechanism protein.
 
  
 0.872
Your Current Organism:
Listeria monocytogenes
NCBI taxonomy Id: 169963
Other names: L. monocytogenes EGD-e, Listeria monocytogenes ATCC BAA-679, Listeria monocytogenes EGD-e, Listeria monocytogenes EGDe, Listeria monocytogenes str. EGD-e, Listeria monocytogenes strain EGD-e
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.