STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lmo1262Lmo1262 protein; Similar to transcriptional regulator (phage-related). (131 aa)    
Predicted Functional Partners:
lmo2700
Lmo2700 protein; Similar to aldo/keto reductase.
   
    0.821
ansB-2
Asparagine--tRNA ligase; Similar to asparaginyl-tRNA synthetases.
   
    0.793
lmo2329
Lmo2329 protein; Similar to a putative repressor protein [Bacteriophage A118].
  
     0.742
cinA
Similar to competence-damage inducible protein CinA; Belongs to the CinA family.
    
 0.639
nifJ
NifJ protein; Highly similar to pyruvate-flavodoxin oxidoreductase.
  
 
 0.625
lmo1261
Lmo1261 protein.
  
    0.559
lmo1263
Lmo1263 protein; Similar to transcriptional regulator.
       0.523
lmo2334
Competence transcription factor (C-terminal part); Similar to transcriptional regulator.
  
    0.522
lmo2287
Putative tape-measure [Bacteriophage A118].
  
     0.489
lmo1025
Lmo1025 protein.
  
    0.482
Your Current Organism:
Listeria monocytogenes
NCBI taxonomy Id: 169963
Other names: L. monocytogenes EGD-e, Listeria monocytogenes ATCC BAA-679, Listeria monocytogenes EGD-e, Listeria monocytogenes EGDe, Listeria monocytogenes str. EGD-e, Listeria monocytogenes strain EGD-e
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.