STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lmo1682Lmo1682 protein; Similar to transmembrane transport proteins. (391 aa)    
Predicted Functional Partners:
lmo1920
Similar to unknown proteins.
  
     0.695
lmo2226
Similar to unknown proteins.
  
    0.592
lmo1678
Lmo1678 protein; Similar to 5-methyltetrahydrofolate-homocysteine methyltransferase (metH).
  
 
 0.563
lmo1680
Lmo1680 protein; Similar to cystathionine gamma-synthase.
  
 
  0.563
lmo1681
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family.
  
 
 0.548
lmo1690
Lmo1690 protein; Similar to hypothetical proteins.
  
     0.526
lmo1679
Lmo1679 protein; Similar to cystathionine beta-lyase.
  
 
  0.514
lmo2750
Lmo2750 protein; Similar to para-aminobenzoate synthase component I.
  
 
 0.513
lmo1697
Lmo1697 protein; Similar to putative transmembrane proteins; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.
  
   
 0.500
lmo1944
Lmo1944 protein; Similar to ferredoxin.
  
  
 0.500
Your Current Organism:
Listeria monocytogenes
NCBI taxonomy Id: 169963
Other names: L. monocytogenes EGD-e, Listeria monocytogenes ATCC BAA-679, Listeria monocytogenes EGD-e, Listeria monocytogenes EGDe, Listeria monocytogenes str. EGD-e, Listeria monocytogenes strain EGD-e
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.