STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lmo1704Lmo1704 protein; Similar to conserved hypothetical proteins. (126 aa)    
Predicted Functional Partners:
nifJ
NifJ protein; Highly similar to pyruvate-flavodoxin oxidoreductase.
    
 0.849
cbiP
Cobyric acid synthase; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.
   
    0.816
lmo1705
Lmo1705 protein; Similar to deoxyguanosine kinase/deoxyadenosine kinase(I) subunit.
 
  
 0.789
lmo1702
Fosfomycin resistance protein FosX; Catalyzes the hydration of fosfomycin. Belongs to the fosfomycin resistance protein family.
  
  
 0.703
lmo1703
Similar to similar to RNA methyltransferases; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.
  
    0.592
lmo1701
Lmo1701 protein.
  
    0.510
lmo1706
Similar to transport proteins; Belongs to the UPF0761 family.
  
  
 0.482
lmo1906
Methylglyoxal synthase; Catalyzes the formation of methylglyoxal from dihydroxyacetone phosphate.
   
    0.459
lmo1371
Dihydrolipoyl dehydrogenase; Similar to branched-chain alpha-keto acid dehydrogenase E3 subunit.
 
 
 0.458
lmo0489
Lmo0489 protein; Similar to NADH:flavin oxidoreductase.
  
 
 0.455
Your Current Organism:
Listeria monocytogenes
NCBI taxonomy Id: 169963
Other names: L. monocytogenes EGD-e, Listeria monocytogenes ATCC BAA-679, Listeria monocytogenes EGD-e, Listeria monocytogenes EGDe, Listeria monocytogenes str. EGD-e, Listeria monocytogenes strain EGD-e
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.