STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lmo1747Lmo1747 protein; Similar to ABC transporter (ATP-binding protein). (255 aa)    
Predicted Functional Partners:
lmo1746
Lmo1746 protein; Similar to ABC transporter (permease).
 0.999
lmo0195
Similar to membrane protein (putative ABC transporter component).
 0.981
lmo1224
Similar to different proteins.
  
 0.981
lmo2115
Lmo2115 protein; Similar to ABC transporter (permease).
 0.951
lmo1745
Lmo1745 protein; Similar to two-component response regulator.
 
  
 0.884
lmo1741
Lmo1741 protein; Similar to two-component sensor histidine kinase.
 
  
 0.859
lmo0608
Lmo0608 protein; Similar to ABC transporter, ATP-binding protein.
 
 
   
0.832
lmo2224
UPF0754 membrane protein lmo2224; Similar to unknown proteins.
   
    0.811
lmo2486
Lmo2486 protein.
   
    0.794
lmo0954
Lmo0954 protein.
   
    0.758
Your Current Organism:
Listeria monocytogenes
NCBI taxonomy Id: 169963
Other names: L. monocytogenes EGD-e, Listeria monocytogenes ATCC BAA-679, Listeria monocytogenes EGD-e, Listeria monocytogenes EGDe, Listeria monocytogenes str. EGD-e, Listeria monocytogenes strain EGD-e
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.