STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lmo1974Lmo1974 protein; Similar to transcription regulators, (GntR family). (249 aa)    
Predicted Functional Partners:
lmo2003
Lmo2003 protein; Similar to transcription regulator GntR family.
  
     0.775
lmo0948
Lmo0948 protein; Similar to transcription regulator.
  
    0.737
lmo1972
Lmo1972 protein; Similar to pentitol PTS system enzyme II B component.
       0.732
lmo1973
Lmo1973 protein; Similar to PTS system enzyme II A component.
       0.732
lmo1971
Lmo1971 protein; Similar to pentitol PTS system enzyme II C component.
       0.703
lmo1970
Lmo1970 protein; Similar to putative phosphotriesterase related proteins.
       0.648
nifJ
NifJ protein; Highly similar to pyruvate-flavodoxin oxidoreductase.
    
  0.628
lmo1969
Lmo1969 protein; Similar to 2-keto-3-deoxygluconate-6-phosphate aldolase.
  
    0.614
lmo1968
Lmo1968 protein; Similar to creatinine amidohydrolases.
  
    0.595
lmo0770
Lmo0770 protein; Similar to transcriptional regulator (LacI family).
  
     0.583
Your Current Organism:
Listeria monocytogenes
NCBI taxonomy Id: 169963
Other names: L. monocytogenes EGD-e, Listeria monocytogenes ATCC BAA-679, Listeria monocytogenes EGD-e, Listeria monocytogenes EGDe, Listeria monocytogenes str. EGD-e, Listeria monocytogenes strain EGD-e
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.