STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lmo2258Lmo2258 protein. (63 aa)    
Predicted Functional Partners:
lmo0955
Lmo0955 protein.
   
  
 0.898
lmo2257
Lmo2257 protein.
       0.773
lmo2292
Portein gp11 [Bacteriophage A118].
   
    0.600
lmo2259
Lmo2259 protein; Similar to phosphotransferase system (PTS) beta-glucoside-specific enzyme IIA.
       0.523
lmo0215
Lmo0215 protein; Conserved membrane-spanning protein.
   
  
 0.512
lmo2380
Similar to proteins involved in resistance to cholate and to NA(+) and in pH homeostasis.
      
 0.510
lmo1464
Lmo1464 protein; Similar to diacylglycerol kinase.
      
 0.509
lmo2293
Protein gp10 [Bacteriophage A118].
   
    0.495
lmo2256
Similar to unknown proteins.
  
    0.472
lmo0653
Lmo0653 protein.
      
 0.432
Your Current Organism:
Listeria monocytogenes
NCBI taxonomy Id: 169963
Other names: L. monocytogenes EGD-e, Listeria monocytogenes ATCC BAA-679, Listeria monocytogenes EGD-e, Listeria monocytogenes EGDe, Listeria monocytogenes str. EGD-e, Listeria monocytogenes strain EGD-e
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