Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| argS | lmo2560 | gene:17595272 | gene:17595271 | Arginyl tRNA synthetase. | Probable DNA-directed RNA polymerase subunit delta; Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling; Belongs to the RpoE family. | 0.507 |
| argS | lmo2562 | gene:17595272 | gene:17595273 | Arginyl tRNA synthetase. | Lmo2562 protein. | 0.940 |
| argS | lmo2563 | gene:17595272 | gene:17595274 | Arginyl tRNA synthetase. | Lmo2563 protein. | 0.624 |
| argS | lmo2564 | gene:17595272 | gene:17595275 | Arginyl tRNA synthetase. | Probable tautomerase lmo2564; Similar to 4-oxalocrotonate isomerase; Belongs to the 4-oxalocrotonate tautomerase family. | 0.420 |
| argS | pyrG | gene:17595272 | gene:17595270 | Arginyl tRNA synthetase. | CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates. | 0.889 |
| lmo1019 | lmo2560 | gene:17593675 | gene:17595271 | Lmo1019 protein; Similar to B. subtilis YitL protein; Belongs to the CvfB family. | Probable DNA-directed RNA polymerase subunit delta; Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling; Belongs to the RpoE family. | 0.414 |
| lmo1019 | lmo2562 | gene:17593675 | gene:17595273 | Lmo1019 protein; Similar to B. subtilis YitL protein; Belongs to the CvfB family. | Lmo2562 protein. | 0.467 |
| lmo2517 | lmo2562 | gene:17595228 | gene:17595273 | Lmo2517 protein. | Lmo2562 protein. | 0.409 |
| lmo2560 | argS | gene:17595271 | gene:17595272 | Probable DNA-directed RNA polymerase subunit delta; Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling; Belongs to the RpoE family. | Arginyl tRNA synthetase. | 0.507 |
| lmo2560 | lmo1019 | gene:17595271 | gene:17593675 | Probable DNA-directed RNA polymerase subunit delta; Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling; Belongs to the RpoE family. | Lmo1019 protein; Similar to B. subtilis YitL protein; Belongs to the CvfB family. | 0.414 |
| lmo2560 | lmo2562 | gene:17595271 | gene:17595273 | Probable DNA-directed RNA polymerase subunit delta; Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling; Belongs to the RpoE family. | Lmo2562 protein. | 0.500 |
| lmo2560 | pyrG | gene:17595271 | gene:17595270 | Probable DNA-directed RNA polymerase subunit delta; Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling; Belongs to the RpoE family. | CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates. | 0.492 |
| lmo2562 | argS | gene:17595273 | gene:17595272 | Lmo2562 protein. | Arginyl tRNA synthetase. | 0.940 |
| lmo2562 | lmo1019 | gene:17595273 | gene:17593675 | Lmo2562 protein. | Lmo1019 protein; Similar to B. subtilis YitL protein; Belongs to the CvfB family. | 0.467 |
| lmo2562 | lmo2517 | gene:17595273 | gene:17595228 | Lmo2562 protein. | Lmo2517 protein. | 0.409 |
| lmo2562 | lmo2560 | gene:17595273 | gene:17595271 | Lmo2562 protein. | Probable DNA-directed RNA polymerase subunit delta; Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling; Belongs to the RpoE family. | 0.500 |
| lmo2562 | lmo2563 | gene:17595273 | gene:17595274 | Lmo2562 protein. | Lmo2563 protein. | 0.570 |
| lmo2562 | lmo2564 | gene:17595273 | gene:17595275 | Lmo2562 protein. | Probable tautomerase lmo2564; Similar to 4-oxalocrotonate isomerase; Belongs to the 4-oxalocrotonate tautomerase family. | 0.414 |
| lmo2562 | murZ | gene:17595273 | gene:17595263 | Lmo2562 protein. | UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. | 0.406 |
| lmo2562 | pyrG | gene:17595273 | gene:17595270 | Lmo2562 protein. | CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates. | 0.493 |
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