STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lmo2663Lmo2663 protein; Similar to polyol dehydrogenase. (343 aa)    
Predicted Functional Partners:
lmo2664
Lmo2664 protein; Similar to sorbitol dehydrogenase.
 
 
0.996
lmo2666
Lmo2666 protein; Similar to PTS system galactitol-specific enzyme IIB component.
 
 
  0.973
lmo2665
Lmo2665 protein; Similar to PTS system galactitol-specific enzyme IIC component.
 
  0.965
lmo2667
Lmo2667 protein; Similar to PTS system galactitol-specific enzyme IIA component.
 
 
  0.947
nifJ
NifJ protein; Highly similar to pyruvate-flavodoxin oxidoreductase.
    
 0.941
lmo2733
Lmo2733 protein; Similar to PTS system, fructose-specific IIABC component.
  
 
  0.932
lmo2659
Similar to ribulose-phosphate 3-epimerase.
  
 
 0.921
lmo0813
Lmo0813 protein; Similar to fructokinases.
 
 
 
 0.920
lmo2668
Lmo2668 protein; Similar to transcriptional antiterminator (BglG family).
 
 
  0.917
fruA
FruA protein; Highly similar to phosphotransferase system (PTS) fructose-specific enzyme IIABC component.
  
 
  0.897
Your Current Organism:
Listeria monocytogenes
NCBI taxonomy Id: 169963
Other names: L. monocytogenes EGD-e, Listeria monocytogenes ATCC BAA-679, Listeria monocytogenes EGD-e, Listeria monocytogenes EGDe, Listeria monocytogenes str. EGD-e, Listeria monocytogenes strain EGD-e
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.