STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lmo2670Lmo2670 protein. (120 aa)    
Predicted Functional Partners:
lmo2671
Lmo2671 protein.
  
  
 0.971
lmo2672
Lmo2672 protein; Weakly similar to transcription regulator.
  
    0.687
lmo2673
Lmo2673 protein.
  
    0.646
lmo2669
Lmo2669 protein.
  
    0.568
lmo0880
Similar to wall associated protein precursor (LPXTG motif).
  
    0.503
lmo2674
Lmo2674 protein; Similar to ribose 5-phosphate epimerase.
  
    0.473
lmo2746
Lmo2746 protein.
 
     0.454
lmo2050
Lmo2050 protein; Similar to excinuclease ABC (subunit A).
  
  
 0.409
lmo2248
Similar to unknown proteins.
      
 0.405
lmo2735
Similar to Sucrose phosphorylase.
   
  
 0.404
Your Current Organism:
Listeria monocytogenes
NCBI taxonomy Id: 169963
Other names: L. monocytogenes EGD-e, Listeria monocytogenes ATCC BAA-679, Listeria monocytogenes EGD-e, Listeria monocytogenes EGDe, Listeria monocytogenes str. EGD-e, Listeria monocytogenes strain EGD-e
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.