STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
lmo2670Lmo2670 protein. (120 aa)    
Predicted Functional Partners:
lmo2671
Lmo2671 protein.
     
 0.846
lmo2672
Lmo2672 protein; Weakly similar to transcription regulator.
       0.683
lmo2669
Lmo2669 protein.
       0.568
lmo2746
Lmo2746 protein.
 
     0.452
lmo2673
Lmo2673 protein.
       0.449
lmo0880
Similar to wall associated protein precursor (LPXTG motif).
  
     0.415
lmo2050
Lmo2050 protein; Similar to excinuclease ABC (subunit A).
     
 0.412
lmo2248
Similar to unknown proteins.
      
 0.405
lmo2735
Similar to Sucrose phosphorylase.
      
 0.405
lmo2840
Similar to Sucrose phosphorylase.
      
 0.405
Your Current Organism:
Listeria monocytogenes
NCBI taxonomy Id: 169963
Other names: L. monocytogenes EGD-e, Listeria monocytogenes ATCC BAA-679, Listeria monocytogenes EGD-e, Listeria monocytogenes EGDe, Listeria monocytogenes str. EGD-e, Listeria monocytogenes strain EGD-e
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.