Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| argF | argG | gene:17594244 | gene:17594776 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family. | Similar to argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.991 |
| argF | argH | gene:17594244 | gene:17594777 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family. | Similar to argininosuccinate lyase. | 0.973 |
| argF | lmo0039 | gene:17594244 | gene:17592674 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family. | Similar to carbamate kinase. | 0.985 |
| argF | lmo0043 | gene:17594244 | gene:17592678 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family. | Similar to arginine deiminase. | 0.994 |
| argG | argF | gene:17594776 | gene:17594244 | Similar to argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family. | 0.991 |
| argG | argH | gene:17594776 | gene:17594777 | Similar to argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | Similar to argininosuccinate lyase. | 0.999 |
| argG | lmo0036 | gene:17594776 | gene:17592671 | Similar to argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | Putrescine carbamoyltransferase; Catalyzes the phosphorolysis of N-carbamoylputrescine to form carbamoyl phosphate and putrescine. Is involved in the degradation pathway of the polyamine agmatine. | 0.957 |
| argG | lmo0043 | gene:17594776 | gene:17592678 | Similar to argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | Similar to arginine deiminase. | 0.935 |
| argH | argF | gene:17594777 | gene:17594244 | Similar to argininosuccinate lyase. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family. | 0.973 |
| argH | argG | gene:17594777 | gene:17594776 | Similar to argininosuccinate lyase. | Similar to argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.999 |
| argH | lmo0036 | gene:17594777 | gene:17592671 | Similar to argininosuccinate lyase. | Putrescine carbamoyltransferase; Catalyzes the phosphorolysis of N-carbamoylputrescine to form carbamoyl phosphate and putrescine. Is involved in the degradation pathway of the polyamine agmatine. | 0.890 |
| argH | lmo0043 | gene:17594777 | gene:17592678 | Similar to argininosuccinate lyase. | Similar to arginine deiminase. | 0.915 |
| lmo0036 | argG | gene:17592671 | gene:17594776 | Putrescine carbamoyltransferase; Catalyzes the phosphorolysis of N-carbamoylputrescine to form carbamoyl phosphate and putrescine. Is involved in the degradation pathway of the polyamine agmatine. | Similar to argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.957 |
| lmo0036 | argH | gene:17592671 | gene:17594777 | Putrescine carbamoyltransferase; Catalyzes the phosphorolysis of N-carbamoylputrescine to form carbamoyl phosphate and putrescine. Is involved in the degradation pathway of the polyamine agmatine. | Similar to argininosuccinate lyase. | 0.890 |
| lmo0036 | lmo0039 | gene:17592671 | gene:17592674 | Putrescine carbamoyltransferase; Catalyzes the phosphorolysis of N-carbamoylputrescine to form carbamoyl phosphate and putrescine. Is involved in the degradation pathway of the polyamine agmatine. | Similar to carbamate kinase. | 0.993 |
| lmo0036 | lmo0043 | gene:17592671 | gene:17592678 | Putrescine carbamoyltransferase; Catalyzes the phosphorolysis of N-carbamoylputrescine to form carbamoyl phosphate and putrescine. Is involved in the degradation pathway of the polyamine agmatine. | Similar to arginine deiminase. | 0.995 |
| lmo0039 | argF | gene:17592674 | gene:17594244 | Similar to carbamate kinase. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family. | 0.985 |
| lmo0039 | lmo0036 | gene:17592674 | gene:17592671 | Similar to carbamate kinase. | Putrescine carbamoyltransferase; Catalyzes the phosphorolysis of N-carbamoylputrescine to form carbamoyl phosphate and putrescine. Is involved in the degradation pathway of the polyamine agmatine. | 0.993 |
| lmo0039 | lmo0043 | gene:17592674 | gene:17592678 | Similar to carbamate kinase. | Similar to arginine deiminase. | 0.991 |
| lmo0043 | argF | gene:17592678 | gene:17594244 | Similar to arginine deiminase. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family. | 0.994 |
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