STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lmo0191Carbohydrate deacetylase; Probably catalyzes the deacetylation of acetylated carbohydrates an important step in the degradation of oligosaccharides. (245 aa)    
Predicted Functional Partners:
lmo0011
Lmo0011 protein; Similar to mevalonate diphosphate decarboxylase.
   
    0.816
lmo0521
Lmo0521 protein; Similar to 6-phospho-beta-glucosidase.
 
 
 0.800
lmo0536
Lmo0536 protein; Similar to 6-phospho-beta-glucosidase.
 
 
 0.796
lmo0190
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.
  
  
 0.726
lmo0192
Lmo0192 protein; Similar to PurR, transcription repressor of purine operon of B. subtilis.
  
    0.534
lmo0271
Lmo0271 protein; Highly similar to phospho-beta-glucosidase; Belongs to the glycosyl hydrolase 1 family.
   
 
  0.511
lmo0261
Lmo0261 protein; Similar to phospho-beta-glucosidase; Belongs to the glycosyl hydrolase 1 family.
   
 
  0.510
lmo0319
Lmo0319 protein; Similar to phospho-beta-glucosidase; Belongs to the glycosyl hydrolase 1 family.
   
 
  0.510
lmo0739
Lmo0739 protein; Similar to 6-phospho-beta-glucosidase; Belongs to the glycosyl hydrolase 1 family.
   
 
  0.510
lmo0901
Permease IIC component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
 
 
 0.460
Your Current Organism:
Listeria monocytogenes
NCBI taxonomy Id: 169963
Other names: L. monocytogenes EGD-e, Listeria monocytogenes ATCC BAA-679, Listeria monocytogenes EGD-e, Listeria monocytogenes EGDe, Listeria monocytogenes str. EGD-e, Listeria monocytogenes strain EGD-e
Server load: low (8%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.