STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lmo0424Putative sugar uptake protein lmo0424; Similar to Staphylococcus xylosus glucose uptake protein. (285 aa)    
Predicted Functional Partners:
lmo0425
Lmo0425 protein; Similar to transcription antiterminator BglG family.
 
  
 0.816
lmo0428
Lmo0428 protein; Similar to PTS fructose-specific enzyme IIC component.
  
  
 0.756
lmo0426
Lmo0426 protein; Similar to PTS fructose-specific enzyme IIA component.
  
  
 0.755
lmo0429
Lmo0429 protein; Similar to sugar hydrolase.
  
  
 0.737
lmo0929
Sortase A; Transpeptidase that anchors surface proteins to the cell wall. Recognizes and modifies its substrate by proteolytic cleavage of a C- terminal sorting signal. Following cleavage, a covalent intermediate is formed via a thioester bond between the sortase and its substrate, which is then transferred and covalently attached to the cell wall (Probable). This sortase recognizes a Leu-Pro-x-Thr-Gly (LPXTG) motif, which is cleaved by the sortase between the threonine and glycine residues. Involved in pathogenesis. May regulate the rate of synthesis and/or the stability of a subset o [...]
  
     0.629
lmo0427
Lmo0427 protein; Similar to PTS fructose-specific enzyme IIB component.
  
    0.529
lmo2287
Putative tape-measure [Bacteriophage A118].
  
     0.510
lmo0422
Lmo0422 protein.
  
    0.459
lmo0421
Lmo0421 protein; Similar to rod shape-determining protein RodA; Belongs to the SEDS family.
       0.456
lmo0423
Lmo0423 protein; Similar to RNA polymerase ECF-type sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.
       0.456
Your Current Organism:
Listeria monocytogenes
NCBI taxonomy Id: 169963
Other names: L. monocytogenes EGD-e, Listeria monocytogenes ATCC BAA-679, Listeria monocytogenes EGD-e, Listeria monocytogenes EGDe, Listeria monocytogenes str. EGD-e, Listeria monocytogenes strain EGD-e
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