STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lmo0641Lmo0641 protein; Similar to heavy metal-transporting ATPase. (626 aa)    
Predicted Functional Partners:
lmo1852
Lmo1852 protein; Similar to putative mercuric ion binding proteins.
  
 
 0.910
lmo2493
Lmo2493 protein; Similar to transcription regulator ArsR family.
 
  
 0.688
lmo1102
Lmo1102 protein; Similar to cadmium efflux system accessory proteins.
 
  
 0.660
nifJ
NifJ protein; Highly similar to pyruvate-flavodoxin oxidoreductase.
  
  
 0.624
lmo0642
Lmo0642 protein.
  
  
 0.597
lmo2575
Lmo2575 protein; Similar to cation transport protein (efflux).
  
  
 0.560
lmo2062
Lmo2062 protein; Similar to copper export proteins.
  
  
 0.539
lmo0485
Lmo0485 protein.
   
  
 0.528
lmo0269
Lmo0269 protein; Similar to transporter.
   
  
 0.510
lmo0821
Lmo0821 protein.
   
  
 0.477
Your Current Organism:
Listeria monocytogenes
NCBI taxonomy Id: 169963
Other names: L. monocytogenes EGD-e, Listeria monocytogenes ATCC BAA-679, Listeria monocytogenes EGD-e, Listeria monocytogenes EGDe, Listeria monocytogenes str. EGD-e, Listeria monocytogenes strain EGD-e
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.