STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lmo1076Lmo1076 protein; Similar to autolysin (EC 3.5.1.28) (N-acetylmuramoyl-L-alanine amidase). (572 aa)    
Predicted Functional Partners:
lmo0705
Similar to flagellar hook-associated protein FlgK.
 
  
 0.724
lmo0682
Lmo0682 protein; Similar to flagellar hook-basal body protein FlgG; Belongs to the flagella basal body rod proteins family.
 
  
 0.713
lmo0713
Lmo0713 protein; Similar to flagellar basal-body M-ring protein fliF.
 
  
 0.702
lmo0697
Similar to flagellar hook protein FlgE.
 
  
 0.698
lmo0711
Similar to flagellar basal-body rod protein flgC.
 
  
 0.682
lmo0696
Lmo0696 protein; Similar to flagellar hook assembly protein.
  
  
 0.637
lmo0710
Flagellar basal body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
  
  
 0.630
lmo1521
Lmo1521 protein; Similar to N-acetylmuramoyl-L-alanine amidase.
 
  
 0.613
lmo1647
Lmo1647 protein; Similar to 1-acylglycerol-3-phosphate O-acyltransferases.
  
  
 0.591
lmo0695
Lmo0695 protein.
  
  
 0.565
Your Current Organism:
Listeria monocytogenes
NCBI taxonomy Id: 169963
Other names: L. monocytogenes EGD-e, Listeria monocytogenes ATCC BAA-679, Listeria monocytogenes EGD-e, Listeria monocytogenes EGDe, Listeria monocytogenes str. EGD-e, Listeria monocytogenes strain EGD-e
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.