node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
alaS | lmo1501 | gene:17594161 | gene:17594158 | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | UPF0473 protein lmo1501; Similar to unknown proteins; Belongs to the UPF0473 family. | 0.579 |
alaS | lmo1502 | gene:17594161 | gene:17594159 | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | Putative pre-16S rRNA nuclease; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family. | 0.846 |
alaS | lmo1503 | gene:17594161 | gene:17594160 | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | UPF0297 protein lmo1503; Belongs to the UPF0297 family. | 0.622 |
alaS | miaA | gene:17594161 | gene:17593951 | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | 0.447 |
lmo0241 | lmo1502 | gene:17592892 | gene:17594159 | Lmo0241 protein; Similar to conserved hypothetical proteins like to B. subtilis YacO protein; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | Putative pre-16S rRNA nuclease; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family. | 0.526 |
lmo0241 | miaA | gene:17592892 | gene:17593951 | Lmo0241 protein; Similar to conserved hypothetical proteins like to B. subtilis YacO protein; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | 0.461 |
lmo1501 | alaS | gene:17594158 | gene:17594161 | UPF0473 protein lmo1501; Similar to unknown proteins; Belongs to the UPF0473 family. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.579 |
lmo1501 | lmo1502 | gene:17594158 | gene:17594159 | UPF0473 protein lmo1501; Similar to unknown proteins; Belongs to the UPF0473 family. | Putative pre-16S rRNA nuclease; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family. | 0.966 |
lmo1501 | lmo1503 | gene:17594158 | gene:17594160 | UPF0473 protein lmo1501; Similar to unknown proteins; Belongs to the UPF0473 family. | UPF0297 protein lmo1503; Belongs to the UPF0297 family. | 0.960 |
lmo1502 | alaS | gene:17594159 | gene:17594161 | Putative pre-16S rRNA nuclease; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.846 |
lmo1502 | lmo0241 | gene:17594159 | gene:17592892 | Putative pre-16S rRNA nuclease; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family. | Lmo0241 protein; Similar to conserved hypothetical proteins like to B. subtilis YacO protein; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | 0.526 |
lmo1502 | lmo1501 | gene:17594159 | gene:17594158 | Putative pre-16S rRNA nuclease; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family. | UPF0473 protein lmo1501; Similar to unknown proteins; Belongs to the UPF0473 family. | 0.966 |
lmo1502 | lmo1503 | gene:17594159 | gene:17594160 | Putative pre-16S rRNA nuclease; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family. | UPF0297 protein lmo1503; Belongs to the UPF0297 family. | 0.991 |
lmo1502 | lmo1793 | gene:17594159 | gene:17594478 | Putative pre-16S rRNA nuclease; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family. | Ribosome maturation factor RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family. | 0.422 |
lmo1502 | lmo2217 | gene:17594159 | gene:17594908 | Putative pre-16S rRNA nuclease; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family. | Lmo2217 protein. | 0.419 |
lmo1502 | lmo2366 | gene:17594159 | gene:17595076 | Putative pre-16S rRNA nuclease; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family. | Lmo2366 protein; Similar to transcription regulator DeoR family. | 0.471 |
lmo1502 | miaA | gene:17594159 | gene:17593951 | Putative pre-16S rRNA nuclease; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family. | tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | 0.620 |
lmo1502 | topA | gene:17594159 | gene:17593932 | Putative pre-16S rRNA nuclease; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family. | DNA topoisomerase 1; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.404 |
lmo1503 | alaS | gene:17594160 | gene:17594161 | UPF0297 protein lmo1503; Belongs to the UPF0297 family. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.622 |
lmo1503 | lmo1501 | gene:17594160 | gene:17594158 | UPF0297 protein lmo1503; Belongs to the UPF0297 family. | UPF0473 protein lmo1501; Similar to unknown proteins; Belongs to the UPF0473 family. | 0.960 |