STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lmo1667Lmo1667 protein; Similar to L-lactate dehydrogenases; Belongs to the LDH/MDH superfamily. (302 aa)    
Predicted Functional Partners:
nifJ
NifJ protein; Highly similar to pyruvate-flavodoxin oxidoreductase.
  
 
 0.989
pykA
Highly similar to pyruvate kinases.
  
 0.981
pgi
Glucose-6-phosphate isomerase.
  
 
 0.928
lmo1915
Lmo1915 protein; Similar to malolactic enzyme (malate dehydrogenase).
  
 0.927
pycA
Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.
   
 0.922
lmo1373
Lmo1373 protein; Similar to branched-chain alpha-keto acid dehydrogenase E1 subunit (2-oxoisovalerate dehydrogenase beta subunit).
   
 0.913
lmo1734
Lmo1734 protein; Similar to glutamate synthase (large subunit).
  
 
 0.913
ilvN
IlvN protein; Similar to acetolactate synthase (acetohydroxy-acid synthase) (small subunit).
   
 0.913
ldh
L-lactate dehydrogenase 1; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family.
  
 
 
0.911
PdhB
PdhB protein; Highly similar to pyruvate dehydrogenase (E1 beta subunit).
   
 0.911
Your Current Organism:
Listeria monocytogenes
NCBI taxonomy Id: 169963
Other names: L. monocytogenes EGD-e, Listeria monocytogenes ATCC BAA-679, Listeria monocytogenes EGD-e, Listeria monocytogenes EGDe, Listeria monocytogenes str. EGD-e, Listeria monocytogenes strain EGD-e
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.