Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
birA | lmo1488 | gene:17594589 | gene:17594145 | Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | Probable nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.527 |
birA | lmo2021 | gene:17594589 | gene:17594706 | Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | Lmo2021 protein. | 0.543 |
birA | nadA | gene:17594589 | gene:17594710 | Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | Quinolinate synthase A; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate. | 0.558 |
birA | nadB | gene:17594589 | gene:17594708 | Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. | 0.565 |
birA | nadC | gene:17594589 | gene:17594709 | Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | NadC protein; Similar to nicotinate-nucleotide pyrophosphorylase; Belongs to the NadC/ModD family. | 0.530 |
cysE | nadA | gene:17592889 | gene:17594710 | Similar to serine O-acetyltransferase. | Quinolinate synthase A; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate. | 0.778 |
lmo0355 | nadA | gene:17593006 | gene:17594710 | Lmo0355 protein; Similar to Flavocytochrome C Fumarate Reductase chain A; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. | Quinolinate synthase A; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate. | 0.576 |
lmo0355 | nadB | gene:17593006 | gene:17594708 | Lmo0355 protein; Similar to Flavocytochrome C Fumarate Reductase chain A; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. | L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. | 0.597 |
lmo0355 | nadC | gene:17593006 | gene:17594709 | Lmo0355 protein; Similar to Flavocytochrome C Fumarate Reductase chain A; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. | NadC protein; Similar to nicotinate-nucleotide pyrophosphorylase; Belongs to the NadC/ModD family. | 0.577 |
lmo1488 | birA | gene:17594145 | gene:17594589 | Probable nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | 0.527 |
lmo1488 | nadA | gene:17594145 | gene:17594710 | Probable nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | Quinolinate synthase A; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate. | 0.680 |
lmo1488 | nadB | gene:17594145 | gene:17594708 | Probable nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. | 0.847 |
lmo1488 | nadC | gene:17594145 | gene:17594709 | Probable nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | NadC protein; Similar to nicotinate-nucleotide pyrophosphorylase; Belongs to the NadC/ModD family. | 0.984 |
lmo1827 | nadA | gene:17594512 | gene:17594710 | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | Quinolinate synthase A; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate. | 0.720 |
lmo2021 | birA | gene:17594706 | gene:17594589 | Lmo2021 protein. | Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | 0.543 |
lmo2021 | lmo2022 | gene:17594706 | gene:17594707 | Lmo2021 protein. | Similar to a NifS-like protein required for NAD biosynthesis. | 0.824 |
lmo2021 | nadA | gene:17594706 | gene:17594710 | Lmo2021 protein. | Quinolinate synthase A; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate. | 0.692 |
lmo2021 | nadB | gene:17594706 | gene:17594708 | Lmo2021 protein. | L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. | 0.700 |
lmo2021 | nadC | gene:17594706 | gene:17594709 | Lmo2021 protein. | NadC protein; Similar to nicotinate-nucleotide pyrophosphorylase; Belongs to the NadC/ModD family. | 0.670 |
lmo2022 | lmo2021 | gene:17594707 | gene:17594706 | Similar to a NifS-like protein required for NAD biosynthesis. | Lmo2021 protein. | 0.824 |
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