Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
comFA | comFC | gene:17595224 | gene:17595223 | ComFA protein; Similar to late competence protein comFA. | ComFC protein; Similar to late competence protein comFC. | 0.970 |
comFA | lmo2514 | gene:17595224 | gene:17595225 | ComFA protein; Similar to late competence protein comFA. | DegV domain-containing protein lmo2514; May bind long-chain fatty acids, such as palmitate, and may play a role in lipid transport or fatty acid metabolism. | 0.482 |
comFA | lmo2515 | gene:17595224 | gene:17595226 | ComFA protein; Similar to late competence protein comFA. | Lmo2515 protein; Similar to B. subtilis two-component response regulator DegU. | 0.506 |
comFC | comFA | gene:17595223 | gene:17595224 | ComFC protein; Similar to late competence protein comFC. | ComFA protein; Similar to late competence protein comFA. | 0.970 |
comFC | lmo2514 | gene:17595223 | gene:17595225 | ComFC protein; Similar to late competence protein comFC. | DegV domain-containing protein lmo2514; May bind long-chain fatty acids, such as palmitate, and may play a role in lipid transport or fatty acid metabolism. | 0.482 |
comFC | lmo2515 | gene:17595223 | gene:17595226 | ComFC protein; Similar to late competence protein comFC. | Lmo2515 protein; Similar to B. subtilis two-component response regulator DegU. | 0.449 |
lmo0590 | lmo1815 | gene:17593241 | gene:17594500 | Lmo0590 protein; Similar to a fusion of two types of conserved hypothetical proteinconserved hypothetical. | Lmo1815 protein. | 0.835 |
lmo0590 | lmo2514 | gene:17593241 | gene:17595225 | Lmo0590 protein; Similar to a fusion of two types of conserved hypothetical proteinconserved hypothetical. | DegV domain-containing protein lmo2514; May bind long-chain fatty acids, such as palmitate, and may play a role in lipid transport or fatty acid metabolism. | 0.867 |
lmo0992 | lmo1137 | gene:17593648 | gene:17593793 | Lmo0992 protein. | Lmo1137 protein. | 0.761 |
lmo0992 | lmo2514 | gene:17593648 | gene:17595225 | Lmo0992 protein. | DegV domain-containing protein lmo2514; May bind long-chain fatty acids, such as palmitate, and may play a role in lipid transport or fatty acid metabolism. | 0.761 |
lmo1137 | lmo0992 | gene:17593793 | gene:17593648 | Lmo1137 protein. | Lmo0992 protein. | 0.761 |
lmo1137 | lmo2514 | gene:17593793 | gene:17595225 | Lmo1137 protein. | DegV domain-containing protein lmo2514; May bind long-chain fatty acids, such as palmitate, and may play a role in lipid transport or fatty acid metabolism. | 0.685 |
lmo1814 | lmo1815 | gene:17594499 | gene:17594500 | Similar to unknown proteins. | Lmo1815 protein. | 0.989 |
lmo1814 | lmo2514 | gene:17594499 | gene:17595225 | Similar to unknown proteins. | DegV domain-containing protein lmo2514; May bind long-chain fatty acids, such as palmitate, and may play a role in lipid transport or fatty acid metabolism. | 0.997 |
lmo1815 | lmo0590 | gene:17594500 | gene:17593241 | Lmo1815 protein. | Lmo0590 protein; Similar to a fusion of two types of conserved hypothetical proteinconserved hypothetical. | 0.835 |
lmo1815 | lmo1814 | gene:17594500 | gene:17594499 | Lmo1815 protein. | Similar to unknown proteins. | 0.989 |
lmo1815 | lmo2514 | gene:17594500 | gene:17595225 | Lmo1815 protein. | DegV domain-containing protein lmo2514; May bind long-chain fatty acids, such as palmitate, and may play a role in lipid transport or fatty acid metabolism. | 0.598 |
lmo2072 | lmo2514 | gene:17594757 | gene:17595225 | Redox-sensing transcriptional repressor Rex; Modulates transcription in response to changes in cellular NADH/NAD(+) redox state. | DegV domain-containing protein lmo2514; May bind long-chain fatty acids, such as palmitate, and may play a role in lipid transport or fatty acid metabolism. | 0.427 |
lmo2514 | comFA | gene:17595225 | gene:17595224 | DegV domain-containing protein lmo2514; May bind long-chain fatty acids, such as palmitate, and may play a role in lipid transport or fatty acid metabolism. | ComFA protein; Similar to late competence protein comFA. | 0.482 |
lmo2514 | comFC | gene:17595225 | gene:17595223 | DegV domain-containing protein lmo2514; May bind long-chain fatty acids, such as palmitate, and may play a role in lipid transport or fatty acid metabolism. | ComFC protein; Similar to late competence protein comFC. | 0.482 |
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