STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOA65_0862Ribose 1,5-bisphosphate isomerase; Belongs to the eIF-2B alpha/beta/delta subunits family. (329 aa)    
Predicted Functional Partners:
eif2a
Translation initiation factor 2 subunit alpha.
   
 0.977
eif2g
Translation initiation factor 2 subunit gamma.
   
 0.969
rbcL
Ribulose bisphosphate carboxylase.
 
  
 0.961
glmU_1
Bifunctional protein GlmU.
   
 0.950
glmU_2
Bifunctional protein GlmU.
   
 0.950
glmU_4
Bifunctional protein GlmU.
   
 0.950
prs_4
Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P).
  
  
 0.820
AOA65_1927
AMP phosphorylase; Catalyzes the conversion of AMP and phosphate to adenine and ribose 1,5-bisphosphate (R15P). Exhibits phosphorylase activity toward CMP and UMP in addition to AMP. Functions in an archaeal AMP degradation pathway, together with R15P isomerase and RubisCO. Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family. Type 2 subfamily.
    
 0.815
hisS
Histidine--tRNA ligase; Belongs to the class-II aminoacyl-tRNA synthetase family.
   
 
 0.721
AOA65_1815
CobQ/CobB/MinD/ParA nucleotide binding domain protein.
   
 
 0.712
Your Current Organism:
Bathyarchaeota archaeon BA1
NCBI taxonomy Id: 1700835
Other names: C. Bathyarchaeota archaeon BA1, Candidatus Bathyarchaeota archaeon BA1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.