STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
top6A_1Type 2 DNA topoisomerase 6 subunit A. (897 aa)    
Predicted Functional Partners:
top6B_1
Type 2 DNA topoisomerase 6 subunit B.
 
 0.992
top6B_2
Type 2 DNA topoisomerase 6 subunit B.
 
 0.992
top6B_3
Type 2 DNA topoisomerase 6 subunit B; Relaxes both positive and negative superturns and exhibits a strong decatenase activity.
 
 0.970
smc_1
Chromosome partition protein Smc.
 
 
 0.914
radB
DNA repair and recombination protein RadB.
 
 
 
 0.854
AOA65_0018
DNA double-strand break repair protein Mre11.
   
 0.842
radA
DNA repair and recombination protein RadA.
 
 
 
0.839
AOA65_1433
Excinuclease ABC subunit C.
   
 
 0.748
AOA65_1015
Hypothetical protein.
       0.707
AOA65_1016
Polynucleotide phosphorylase/polyadenylase.
 
     0.705
Your Current Organism:
Bathyarchaeota archaeon BA1
NCBI taxonomy Id: 1700835
Other names: C. Bathyarchaeota archaeon BA1, Candidatus Bathyarchaeota archaeon BA1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.