STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOA65_1099Isoaspartyl peptidase. (319 aa)    
Predicted Functional Partners:
AOA65_0918
Asparagine synthetase B.
     
 0.970
AOA65_2370
Isoaspartyl peptidase.
  
  
 
0.909
pyrB
Aspartate carbamoyltransferase.
    
  0.907
pyrI
Aspartate carbamoyltransferase regulatory chain; Involved in allosteric regulation of aspartate carbamoyltransferase.
    
  0.904
AOA65_0374
Hypothetical protein; Formiminotransferase domain, N-terminal subdomain.
     
 0.809
maiA
Maleate isomerase.
     
  0.800
AOA65_1100
Hypothetical protein.
       0.773
AOA65_0403
Putative ABC transporter ATP-binding protein.
 
  
 0.648
argF_1
Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
    
 0.577
argF_2
Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
    
 0.577
Your Current Organism:
Bathyarchaeota archaeon BA1
NCBI taxonomy Id: 1700835
Other names: C. Bathyarchaeota archaeon BA1, Candidatus Bathyarchaeota archaeon BA1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.