STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
thrC_6Threonine synthase; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine. (433 aa)    
Predicted Functional Partners:
thrC_9
Threonine synthase.
  
 
0.985
AOA65_0932
Homoserine dehydrogenase.
  
 0.942
leuD
Isopropylmalate/citramalate isomerase small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 2 subfamily.
  
  
 0.830
AOA65_2239
Phosphoserine phosphatase.
  
 0.761
aspC_1
Aspartate aminotransferase.
  
 0.728
aspC_3
Aspartate aminotransferase.
  
 0.728
aspC_4
Aspartate aminotransferase.
  
 0.728
aspC_5
Aspartate aminotransferase.
  
 0.728
gyaR_1
Glyoxylate reductase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
  
 0.678
leuB
3-isopropylmalate/3-methylmalate dehydrogenase.
  
 
 0.633
Your Current Organism:
Bathyarchaeota archaeon BA1
NCBI taxonomy Id: 1700835
Other names: C. Bathyarchaeota archaeon BA1, Candidatus Bathyarchaeota archaeon BA1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.