STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pycB_1Pyruvate carboxylase subunit B. (183 aa)    
Predicted Functional Partners:
AOA65_1609
Putative biotin ligase.
 
 
 0.973
pycB_2
Pyruvate carboxylase subunit B.
 
     0.885
AOA65_1608
Malonate decarboxylase subunit beta.
 
  
 0.815
mdh
Malate dehydrogenase; Belongs to the LDH/MDH superfamily.
    
 0.812
AOA65_0860
Transketolase.
    
 0.800
AOA65_2206
Methylmalonyl-CoA epimerase; Similarity search against UniProtKB Archaea.
 
  
 0.775
AOA65_0859
Pyruvate dehydrogenase subunit beta.
    
 0.767
porB_1
Pyruvate synthase subunit PorB.
  
 
 0.741
porB_2
Pyruvate synthase subunit PorB.
  
 
 0.741
AOA65_0858
Branched-chain alpha-keto acid dehydrogenase subunit E2.
 
  
 0.738
Your Current Organism:
Bathyarchaeota archaeon BA1
NCBI taxonomy Id: 1700835
Other names: C. Bathyarchaeota archaeon BA1, Candidatus Bathyarchaeota archaeon BA1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.