STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOA65_2259Glutaredoxin. (102 aa)    
Predicted Functional Partners:
pyrH
Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP.
  
 
  0.812
pol_5
DNA polymerase.
     
 0.790
AOA65_2260
Anaerobic ribonucleoside triphosphate reductase.
     
 0.729
AOA65_2318
Deoxycytidine triphosphate deaminase.
  
 
 0.709
gpsA
Glycerol-3-phosphate dehydrogenase (NAD(P)+).
  
  
 0.664
AOA65_1609
Putative biotin ligase.
     
 0.652
AOA65_1792
5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase.
  
  
 0.599
rpl13
50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.
  
  
 0.575
ppa_1
Inorganic pyrophosphatase.
  
  
 0.564
ppa_2
Inorganic pyrophosphatase.
  
  
 0.564
Your Current Organism:
Bathyarchaeota archaeon BA1
NCBI taxonomy Id: 1700835
Other names: C. Bathyarchaeota archaeon BA1, Candidatus Bathyarchaeota archaeon BA1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.