STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQB97662.14-hydroxytetrahydrobiopterin dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. (402 aa)    
Predicted Functional Partners:
KQB97663.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.892
KQB95996.1
30S ribosomal protein S14; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.666
KQB97661.1
Rrf2 family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.660
KQB95501.1
GTP cyclohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.573
KQB95134.1
Methionine aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.561
KQB95761.1
50S ribosomal protein L28; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.516
KQB98406.1
Iron ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.493
KQB96271.1
precorrin-6Y C5,15-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.485
KQB96180.1
precorrin-3B methylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.482
KQB98465.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.480
Your Current Organism:
Loktanella sp. 1ANDIMAR09
NCBI taxonomy Id: 1700845
Other names: L. sp. 1ANDIMAR09
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