STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQB98006.1Histidine phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (196 aa)    
Predicted Functional Partners:
KQB98509.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.904
KQB98028.1
Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.895
KQB96456.1
Nitrogen fixation protein FixL; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.885
KQB97977.1
Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.867
KQB96342.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.867
KQB97349.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.845
KQB96613.1
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.805
KQB96528.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.755
KQB98007.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.735
KQB98008.1
ornithine-acyl-ACP acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.626
Your Current Organism:
Loktanella sp. 1ANDIMAR09
NCBI taxonomy Id: 1700845
Other names: L. sp. 1ANDIMAR09
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.