KQB98435.1 protein (Loktanella sp. 1ANDIMAR09)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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[Homology]

Score

KQB98435.1

ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (358 aa)

Predicted Functional Partners:

KQB98433.1

0.989

KQB98436.1

0.989

KQB98434.1

0.985

KQB98437.1

0.961

KQB98094.1

0.945

KQB98096.1

0.938

KQB95100.1

0.934

KQB95179.1

0.931

KQB98095.1

0.923

KQB95361.1

0.913

Your Current Organism:

Loktanella sp. 1ANDIMAR09

NCBI taxonomy Id: 1700845
Other names: L. sp. 1ANDIMAR09

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KQB95100.1	KQB95179.1	AL073_17640	AL073_17650	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Branched-chain amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.980
KQB95100.1	KQB98094.1	AL073_17640	AL073_04135	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Branched-chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.836
KQB95100.1	KQB98096.1	AL073_17640	AL073_04155	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Branched-chain amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.864
KQB95100.1	KQB98434.1	AL073_17640	AL073_06115	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.817
KQB95100.1	KQB98435.1	AL073_17640	AL073_06120	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.934
KQB95100.1	KQB98436.1	AL073_17640	AL073_06125	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.766
KQB95100.1	KQB98437.1	AL073_17640	AL073_06130	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Branched-chain amino acid ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.794
KQB95179.1	KQB95100.1	AL073_17650	AL073_17640	Branched-chain amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.980
KQB95179.1	KQB95361.1	AL073_17650	AL073_16015	Branched-chain amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Branched-chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.862
KQB95179.1	KQB98094.1	AL073_17650	AL073_04135	Branched-chain amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Branched-chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.866
KQB95179.1	KQB98095.1	AL073_17650	AL073_04140	Branched-chain amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Branched-chain amino acid ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.848
KQB95179.1	KQB98096.1	AL073_17650	AL073_04155	Branched-chain amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Branched-chain amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.725
KQB95179.1	KQB98433.1	AL073_17650	AL073_06110	Branched-chain amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.882
KQB95179.1	KQB98435.1	AL073_17650	AL073_06120	Branched-chain amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.931
KQB95179.1	KQB98436.1	AL073_17650	AL073_06125	Branched-chain amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.778
KQB95179.1	KQB98437.1	AL073_17650	AL073_06130	Branched-chain amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Branched-chain amino acid ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.869
KQB95361.1	KQB95179.1	AL073_16015	AL073_17650	Branched-chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Branched-chain amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.862
KQB95361.1	KQB98094.1	AL073_16015	AL073_04135	Branched-chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Branched-chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.865
KQB95361.1	KQB98096.1	AL073_16015	AL073_04155	Branched-chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Branched-chain amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.868
KQB95361.1	KQB98434.1	AL073_16015	AL073_06115	Branched-chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.747