STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQB95304.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (180 aa)    
Predicted Functional Partners:
KQB95303.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.664
KQB95840.1
Pilus assembly protein CpaB; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.624
KQB95305.1
Nicotinate phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.554
KQB97269.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.509
KQB97349.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.502
KQB95846.1
Pilus assembly protein TadC; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.502
KQB95687.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.499
KQB95845.1
Pilus assembly protein TadB; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.452
KQB98027.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.433
Your Current Organism:
Loktanella sp. 1ANDIMAR09
NCBI taxonomy Id: 1700845
Other names: L. sp. 1ANDIMAR09
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.