STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQM09522.1Hypothetical protein; Catalyzes the removal of dipeptides from the N-terminus of oligopeptides. (717 aa)    
Predicted Functional Partners:
KQM08507.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.602
KQM09523.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.552
KQM09593.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.550
KQM08847.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.546
KQM08590.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.518
ispG
Hypothetical protein; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family.
       0.494
KQM09567.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.488
KQM09351.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.424
KQM09356.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.424
KQM09524.1
Aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase C1 family.
  
     0.423
Your Current Organism:
Bacteroides periocalifornicus
NCBI taxonomy Id: 1702214
Other names: Bacteroides sp. 128, Bacteroidetes bacterium 12B, C. [Bacteroides] periocalifornicus, Candidatus Bacteroides periocalifornicus, Candidatus [Bacteroides] periocalifornicus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.